10/14/2009 — A Quasi-Likelihood Approach to Genome Wide Association Studies

Matthew Bryan

A common issue in Genome Wide Association Studies (GWAS) is relatedness between subjects due to restricting sampling to a confined homogenous population.  As a result, the genetic data can be correlated across subject which may not be accounted for by common genetic testing methods.  This presentation will discuss a method suggested by Timothy Thornton and Mary McPeek that is designed to account for relatedness between subjects for genetic data.  The method uses a quasi-likelihood model approach to generate a quasi-likelihood score statistic.  This statistic can be shown to be locally most powerful for testing genetic associations with a phenotype.  Thus the method is expected to provide higher power for detecting small genetic effects.

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